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"topics": [ "calculate_mcc_multi" ] }, { "page": "calculate_percent", "title": "'calculate_percent'", "topics": [ "calculate_percent" ] }, { "page": "calculate_simpson", "title": "'calculate_simpson'", "topics": [ "calculate_simpson" ] }, { "page": "calculate_simpson_by_group", "title": "'calculate_simpson_by_group'", "topics": [ "calculate_simpson_by_group" ] }, { "page": "calculate_state", "title": "'calculate_state'", "topics": [ "calculate_state" ] }, { "page": "calculate_variant_within_group", "title": "'identify_group_variant_breakdown'", "topics": [ "calculate_variant_within_group" ] }, { "page": "check_fasta_meta_mapping", "title": "'check_fasta_meta_mapping'", "topics": [ "check_fasta_meta_mapping" ] }, { "page": "check_meta_target", "title": "'check_meta_target'", "topics": [ "check_meta_target" ] }, { "page": "check_multistate", "title": "'check_multistate'", "topics": [ "check_multistate" ] }, { "page": "check_percent", "title": "'check_percent'", "topics": [ "check_percent" ] }, { "page": "coef.binomial_naive_bayes", "title": "'coef.binomial_naive_bayes'", "topics": [ "coef.binomial_naive_bayes" ] }, { "page": "combine_fastq_search_result", "title": "'combine_fastq_search_result'", "topics": [ "combine_fastq_search_result" ] }, { "page": "combine_search_string_result", "title": "'combine_search_string_result'", "topics": [ "combine_search_string_result" ] }, { "page": "combine_search_string_result_from_files", "title": "'combine_search_string_result_from_files'", "topics": [ "combine_search_string_result_from_files" ] }, { "page": "combine_search_string_result_from_list", "title": "'combine_search_string_result_from_list'", "topics": [ "combine_search_string_result_from_list" ] }, { "page": "estimate_coverage", "title": "'estimate_coverage'", "topics": [ "estimate_coverage" ] }, { "page": "extend_length", "title": "'extend_length'", "topics": [ "extend_length" ] }, { "page": "find_optimised_snps", "title": "'find_optimised_snps'", 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"get_metric_fun", "title": "'get_metric_fun'", "topics": [ "get_metric_fun" ] }, { "page": "get_snps_set", "title": "'get_snps_set'", "topics": [ "get_snps_set" ] }, { "page": "identify_overlaps", "title": "'identify_overlaps'", "topics": [ "identify_overlaps" ] }, { "page": "infer_from_combined", "title": "'infer_from_combined'", "topics": [ "infer_from_combined" ] }, { "page": "iterate_merge", "title": "'iterate_merge'", "topics": [ "iterate_merge" ] }, { "page": "iterate_through", "title": "'iterate_through'", "topics": [ "iterate_through" ] }, { "page": "map_profile_to_target", "title": "'map_profile_to_target'", "topics": [ "map_profile_to_target" ] }, { "page": "match_count", "title": "'match_count'", "topics": [ "match_count" ] }, { "page": "mcc_calculation", "title": "'mcc_calculation'", "topics": [ "mcc_calculation" ] }, { "page": "merge_fasta", "title": "'merge_fasta'", "topics": [ "merge_fasta" ] }, { "page": "output_result", "title": "'output_result'", "topics": [ 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